Transcript: lnc-SCGB2B2-133:3

Basic information

LNCipedia transcript ID: lnc-SCGB2B2-133:3 
LNCipedia gene ID: lnc-SCGB2B2-133
Location (hg38): chr19:34168860-34172365
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 2320 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000040754.1|MICT00000173187.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 7.4568 non-coding 
CPAT coding probability 8.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SCGB2B2-133:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RPS4XP21-8:3
5.0 lnc-RPS4XP21-8:3
5.1 lnc-SCGB2B2-28:3
5.2 lnc-SCGB2B2-133:3