Transcript: lnc-SCRN1-1:3

Basic information

LNCipedia transcript ID: lnc-SCRN1-1:3 
LNCipedia gene ID: lnc-SCRN1-1
Location (hg38): chr7:29684772-29685821
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1050 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT119833; NR_027347
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 240.3457 coding 
CPAT coding probability 74.99% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SCRN1-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SCRN1-1:3
4.0 lnc-SCRN1-1:3
4.1 lnc-SCRN1-1:3
5.0 lnc-SCRN1-1:3
5.1 lnc-PDE1C-25:2
5.2 lnc-SCRN1-1:3