Transcript: lnc-SDE2-1:1

Basic information

LNCipedia transcript ID: lnc-SDE2-1:1 
LNCipedia gene ID: lnc-SDE2-1
Location (hg38): chr1:226061948-226062511
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 359 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT009870
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SDE2-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C1orf55-2:1
4.0 lnc-C1orf55-2:1
4.1 lnc-C1orf55-1:4
5.0 lnc-C1orf55-1:4
5.1 lnc-LEFTY2-8:1
5.2 lnc-SDE2-1:1