Transcript: lnc-SDHC-3:1

Basic information

LNCipedia transcript ID: lnc-SDHC-3:1 
LNCipedia gene ID: lnc-SDHC-3
Ensembl Gene ID: ENSG00000283696
Ensembl Transcript ID: ENST00000636161
Location (hg38): chr1:161399409-161422424
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 997 bp
Exons: 2
Sources: Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000636161.1
Alternative gene names: ENSG00000283696.1; RP11-122G18.12; AL592295.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -7.1789 non-coding 
CPAT coding probability 8.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SDHC-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SDHC-3:1
5.0 lnc-SDHC-3:1
5.1 lnc-PCP4L1-5:1
5.2 lnc-SDHC-3:1