Transcript: lnc-SDR16C5-2:1

Basic information

LNCipedia transcript ID: lnc-SDR16C5-2:1 
LNCipedia gene ID: lnc-SDR16C5-2
Location (hg38): chr8:56446006-56446671
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 579 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT126697
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -69.2027 non-coding 
CPAT coding probability 9.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SDR16C5-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SDR16C5-2:1
4.0 lnc-SDR16C5-2:1
4.1 lnc-SDR16C5-2:1
5.0 lnc-SDR16C5-2:1
5.1 lnc-IMPAD1-2:2
5.2 lnc-SDR16C5-2:1