Transcript: lnc-SDSL-13:1

Basic information

LNCipedia transcript ID: lnc-SDSL-13:1 
LNCipedia gene ID: lnc-SDSL-13
Location (hg38): chr12:114621507-114622920
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 622 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00020574; NONHSAT030884
Alternative gene names: XLOC_009890; linc-MAP1LC3B2-9


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -61.1947 non-coding 
CPAT coding probability 0.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SDSL-13:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-116D17.1.1-11:1
3.1 lnc-RP11-116D17.1.1-12:1
4.0 lnc-RP11-116D17.1.1-12:1
4.1 lnc-RP11-116D17.1.1-12:1
5.0 lnc-RP11-116D17.1.1-12:1
5.1 lnc-PLBD2-14:1
5.2 lnc-SDSL-13:1