Transcript: lnc-SDSL-6:5

Basic information

LNCipedia transcript ID: lnc-SDSL-6:5 
LNCipedia gene ID: lnc-SDSL-6
Location (hg38): chr12:114077145-114095184
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1174 bp
Exons: 3
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT030865; FPKM1_group_7167_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -36.3083 non-coding 
CPAT coding probability 1.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SDSL-6:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SDSL-6:5
4.0 lnc-SDSL-6:5
4.1 lnc-SDSL-6:5
5.0 lnc-SDSL-6:5
5.1 lnc-PLBD2-11:2
5.2 lnc-SDSL-6:5