Transcript: lnc-SEC14L3-2:2

Basic information

LNCipedia transcript ID: lnc-SEC14L3-2:2 
LNCipedia gene ID: lnc-SEC14L3-2
Ensembl Gene ID: ENSG00000272689
Ensembl Transcript ID: ENST00000608952
Location (hg38): chr22:30421206-30421536
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 331 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000608952.1
Alternative gene names: ENSG00000272689.1; RP4-539M6.21; AC004832.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -192.9861 non-coding 
CPAT coding probability 0.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SEC14L3-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SEC14L3-2:1
4.0 lnc-SEC14L3-2:1
4.1 lnc-RNF215-2:3
5.0 lnc-RNF215-2:3
5.1 lnc-PLA2G3-19:1
5.2 lnc-SEC14L3-2:2