Transcript: lnc-SEL1L-16:1

Basic information

LNCipedia transcript ID: lnc-SEL1L-16:1 
LNCipedia gene ID: lnc-SEL1L-16
Location (hg38): chr14:84594474-84599613
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2313 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_1022_chr14:85060817-85065957_brain
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 13.0922 non-coding 
CPAT coding probability 5.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SEL1L-16:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SEL1L-16:1
4.0 lnc-SEL1L-16:1
4.1 lnc-SEL1L-16:1
5.0 lnc-SEL1L-16:1
5.1 lnc-GALC-49:1
5.2 lnc-SEL1L-16:1