Transcript: lnc-SELE-1:2

Basic information

LNCipedia transcript ID: lnc-SELE-1:2 
LNCipedia gene ID: lnc-SELE-1
Location (hg38): chr1:169701577-169708456
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 628 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT007472
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 10.5263 non-coding 
CPAT coding probability 2.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SELE-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SELE-1:2
4.0 lnc-SELE-1:2
4.1 lnc-SELE-1:2
5.0 lnc-SELE-1:2
5.1 lnc-SH2D1B-84:1
5.2 lnc-SELE-1:2