Transcript: lnc-SELENOI-1:3

Basic information

LNCipedia transcript ID: lnc-SELENOI-1:3 
LNCipedia gene ID: lnc-SELENOI-1
Location (hg38): chr2:26298607-26306323
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2513 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00003609; NONHSAT069689
Alternative gene names: XLOC_001401; linc-EPT1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 17.1034 non-coding 
CPAT coding probability 3.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SELENOI-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-EPT1-1:1
3.1 lnc-EPT1-1:1
4.0 lnc-EPT1-1:1
4.1 lnc-EPT1-1:1
5.0 lnc-EPT1-1:1
5.1 lnc-SNX17-30:6
5.2 lnc-SELENOI-1:3