Transcript: lnc-SEMA3B-1:7

Basic information

LNCipedia transcript ID: lnc-SEMA3B-1:7 
LNCipedia gene ID: lnc-SEMA3B-1
Location (hg38): chr3:50262966-50266848
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 279 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00006840
Alternative gene names: XLOC_002647; linc-SEMA3B


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -332.8246 non-coding 
CPAT coding probability 1.94% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SEMA3B-1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GNAI2-1:4
3.1 lnc-GNAI2-1:4
4.0 lnc-GNAI2-1:4
4.1 lnc-C3orf45-1:9
5.0 lnc-C3orf45-1:9
5.1 lnc-GNAI2-1:31
5.2 lnc-SEMA3B-1:7