Transcript: lnc-SEMA4D-5:2

Basic information

LNCipedia transcript ID: lnc-SEMA4D-5:2 
LNCipedia gene ID: lnc-SEMA4D-5
Location (hg38): chr9:89488374-89620682
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1080 bp
Exons: 8
Sources: Nielsen et al.,2014
Alternative transcript names: l_3806_chr9:92103288-92187384_thyroid
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 10.3563 non-coding 
CPAT coding probability 0.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SEMA4D-5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SEMA4D-5:2
4.0 lnc-SEMA4D-5:2
4.1 lnc-SEMA4D-5:2
5.0 lnc-SEMA4D-5:2
5.1 lnc-SEMA4D-5:2
5.2 lnc-SEMA4D-5:2