Transcript: lnc-SENP6-2:2

Basic information

LNCipedia transcript ID: lnc-SENP6-2:2 
LNCipedia gene ID: lnc-SENP6-2
Location (hg38): chr6:75360812-75362011
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 265 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000415457.1; RP11-415D17.3-002; OTTHUMT00000041260.1; NONHSAT113611
Alternative gene names: ENSG00000237174.1; RP11-415D17.3; OTTHUMG00000015054.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -207.3861 non-coding 
CPAT coding probability 2.97% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SENP6-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SENP6-2:2
4.0 lnc-SENP6-2:2
4.1 lnc-SENP6-2:2
5.0 lnc-SENP6-2:2
5.1 lnc-CYB5R4-75:8
5.2 lnc-SENP6-2:2