Transcript: lnc-SEPT10-3:1

Basic information

LNCipedia transcript ID: lnc-SEPT10-3:1 
LNCipedia gene ID: lnc-SEPT10-3
Ensembl Gene ID: ENSG00000282033
Ensembl Transcript ID: ENST00000632044
Location (hg38): chr2:109758799-109760364
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 823 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000632044.1
Alternative gene names: ENSG00000282033.1; RP11-506F3.1; AC074387.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 3.7198 non-coding 
CPAT coding probability 0.94% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SEPT10-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-SEPT10-3:1
4.1 lnc-SEPT10-3:1
5.0 lnc-SEPT10-3:1
5.1 lnc-EN1-98:1
5.2 lnc-SEPT10-3:1