Transcript: lnc-SEPT3-6:1

Basic information

LNCipedia transcript ID: lnc-SEPT3-6:1 
LNCipedia gene ID: lnc-SEPT3-6
Location (hg38): chr22:41952101-41958953
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1603 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT087000
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 797.2298 coding 
CPAT coding probability 21.82% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SEPT3-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SEPT3-1:1
4.0 LINC00634:1
4.1 LINC00634:1
5.0 LINC00634:1
5.1 lnc-WBP2NL-2:1
5.2 lnc-SEPT3-6:1