Transcript: lnc-SEPT7-1:12

Basic information

LNCipedia transcript ID: lnc-SEPT7-1:12 
LNCipedia gene ID: lnc-SEPT7-1
RefSeq ID: NR_108082
Location (hg38): chr7:35716437-35719712
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1173 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_108082; NR_108082.1
Alternative gene names: LOC100506725


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -111.4354 non-coding 
CPAT coding probability 3.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SEPT7-1:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SEPT7-1:12
4.0 lnc-SEPT7-1:12
4.1 lnc-SEPT7-1:12
5.0 lnc-SEPT7-1:12
5.1 lnc-CCDC129-44:7
5.2 lnc-SEPT7-1:12