Transcript: lnc-SEPT7-1:16

Basic information

LNCipedia transcript ID: lnc-SEPT7-1:16 
LNCipedia gene ID: lnc-SEPT7-1
Location (hg38): chr7:35716466-35719712
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1306 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000227544.4|ENST00000458087.3
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -111.4354 non-coding 
CPAT coding probability 0.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SEPT7-1:16 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SEPT7-1:16
5.0 lnc-SEPT7-1:16
5.1 lnc-CCDC129-44:9
5.2 lnc-SEPT7-1:16