Transcript: lnc-SEPT7-1:7

Basic information

LNCipedia transcript ID: lnc-SEPT7-1:7 
LNCipedia gene ID: lnc-SEPT7-1
Location (hg38): chr7:35731731-35734611
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1403 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00013411; NONHSAT120095
Alternative gene names: XLOC_006043; linc-SEPT7-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -77.1452 non-coding 
CPAT coding probability 3.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SEPT7-1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SEPT7-1:7
3.1 lnc-SEPT7-1:7
4.0 lnc-SEPT7-1:7
4.1 lnc-SEPT7-1:7
5.0 lnc-SEPT7-1:7
5.1 lnc-CCDC129-44:20
5.2 lnc-SEPT7-1:7