Transcript: lnc-SEPT7-3:10

Basic information

LNCipedia transcript ID: lnc-SEPT7-3:10 
LNCipedia gene ID: lnc-SEPT7-3
RefSeq ID: NR_136255
Location (hg38): chr7:35695206-35699413
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4208 bp
Exons: 1
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_136255.1
Alternative gene names: LOC101930085


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 1.7245 non-coding 
CPAT coding probability 1.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SEPT7-3:10 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-CCDC129-43:4
5.1 lnc-CCDC129-43:4
5.2 lnc-SEPT7-3:10