Transcript: lnc-SEPT9-2:1

Basic information

LNCipedia transcript ID: lnc-SEPT9-2:1 
LNCipedia gene ID: lnc-SEPT9-2
Location (hg38): chr17:77528125-77536591
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4440 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; NONCODE v4
Alternative transcript names: ENST00000543179; NONHSAT056157
Alternative gene names: ENSG00000250179; AC021683.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1.7507 non-coding 
CPAT coding probability 74.13% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SEPT9-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SEPT9-2:1
3.1 lnc-SEPT9-2:1
4.0 lnc-SEPT9-2:1
4.1 lnc-SEPT9-2:1
5.0 lnc-SEPT9-2:1
5.1 lnc-ZACN-31:2
5.2 lnc-SEPT9-2:1