Transcript: lnc-SEPT9-3:12

Basic information

LNCipedia transcript ID: lnc-SEPT9-3:12 
LNCipedia gene ID: lnc-SEPT9-3
Location (hg38): chr17:77546940-77561606
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1377 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000267506.1|ENCT00000178633.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 17.5704 non-coding 
CPAT coding probability 3.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SEPT9-3:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SEPT9-3:12
5.0 lnc-SEPT9-3:12
5.1 lnc-ZACN-32:2
5.2 lnc-SEPT9-3:12