Transcript: lnc-SEPT9-3:16

Basic information

LNCipedia transcript ID: lnc-SEPT9-3:16 
LNCipedia gene ID: lnc-SEPT9-3
RefSeq ID: NR_040050
Location (hg38): chr17:77546941-77565024
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4232 bp
Exons: 2
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_040050.1
Alternative gene names: LOC100507351


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 32.1513 non-coding 
CPAT coding probability 4.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SEPT9-3:16 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-ZACN-32:9
5.1 lnc-ZACN-32:9
5.2 lnc-SEPT9-3:16