Transcript: lnc-SEPT9-3:9

Basic information

LNCipedia transcript ID: lnc-SEPT9-3:9 
LNCipedia gene ID: lnc-SEPT9-3
Location (hg38): chr17:77546941-77565021
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4229 bp
Exons: 2
Sources: NONCODE v4; Refseq - Dec 2014
Alternative transcript names: NONHSAT056161; NR_040050
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 32.1513 non-coding 
CPAT coding probability 8.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SEPT9-3:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SEPT9-3:9
4.0 lnc-SEPT9-3:9
4.1 lnc-SEPT9-3:9
5.0 lnc-SEPT9-3:9
5.1 lnc-ZACN-32:8
5.2 lnc-SEPT9-3:9