Transcript: lnc-SERHL2-1:14

Basic information

LNCipedia transcript ID: lnc-SERHL2-1:14 
LNCipedia gene ID: lnc-SERHL2-1
Location (hg38): chr22:42500604-42502653
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1588 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000172250.10|ENST00000434218.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 55.6831 non-coding 
CPAT coding probability 3.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SERHL2-1:14 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SERHL2-1:14
5.0 lnc-SERHL2-1:14
5.1 lnc-SMDT1-8:6
5.2 lnc-SERHL2-1:14