Transcript: lnc-SERPINB1-5:2

Basic information

LNCipedia transcript ID: lnc-SERPINB1-5:2 
LNCipedia gene ID: lnc-SERPINB1-5
Location (hg38): chr6:2840678-2852914
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1939 bp
Exons: 9
Sources: NONCODE v4
Alternative transcript names: NONHSAT106787
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 32.7456 non-coding 
CPAT coding probability 11.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SERPINB1-5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SERPINB1-2:2
4.0 lnc-SERPINB1-5:2
4.1 lnc-SERPINB1-5:2
5.0 lnc-SERPINB1-5:2
5.1 lnc-ECI2-100:2
5.2 lnc-SERPINB1-5:2