Transcript: lnc-SERPINB1-5:4

Basic information

LNCipedia transcript ID: lnc-SERPINB1-5:4 
LNCipedia gene ID: lnc-SERPINB1-5
Location (hg38): chr6:2838549-2841862
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 580 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT106780
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score -216.4408 non-coding 
CPAT coding probability 55.87% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SERPINB1-5:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SERPINB1-2:8
4.0 lnc-SERPINB1-5:4
4.1 lnc-SERPINB1-5:4
5.0 lnc-SERPINB1-5:4
5.1 lnc-ECI2-100:4
5.2 lnc-SERPINB1-5:4