Transcript: lnc-SERPINB5-1:3

Basic information

LNCipedia transcript ID: lnc-SERPINB5-1:3 
LNCipedia gene ID: lnc-SERPINB5-1
Location (hg38): chr18:63367324-63368051
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 728 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000267390.1|FTMT27200004615.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -172.7734 non-coding 
CPAT coding probability 2.92% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SERPINB5-1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SERPINB5-1:3
5.0 lnc-SERPINB5-1:3
5.1 lnc-WDR7-77:2
5.2 lnc-SERPINB5-1:3