Transcript: lnc-SERPINB8-2:2

Basic information

LNCipedia transcript ID: lnc-SERPINB8-2:2 
LNCipedia gene ID: lnc-SERPINB8-2
Location (hg38): chr18:64156215-64159299
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 387 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000452004; ENST00000452004.1; AC100848.1-002; OTTHUMT00000134075.1; NONHSAT059688
Alternative gene names: ENSG00000236392; AC100848.1; ENSG00000236392.1; OTTHUMG00000060638.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -318.2187 non-coding 
CPAT coding probability 7.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SERPINB8-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SERPINB8-2:2
3.1 lnc-SERPINB8-2:2
4.0 lnc-SERPINB8-2:2
4.1 lnc-SERPINB8-2:2
5.0 lnc-SERPINB8-2:2
5.1 lnc-WDR7-87:2
5.2 lnc-SERPINB8-2:2