Transcript: lnc-SERTAD2-1:5

Basic information

LNCipedia transcript ID: lnc-SERTAD2-1:5 
LNCipedia gene ID: lnc-SERTAD2-1
Location (hg38): chr2:64522187-64524139
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1953 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000260101.1|ENST00000561559.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 7.6506 non-coding 
CPAT coding probability 0.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SERTAD2-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SERTAD2-1:5
5.0 lnc-SERTAD2-1:5
5.1 lnc-GKN2-105:5
5.2 lnc-SERTAD2-1:5