Transcript: lnc-SERTM2-1:5

Basic information

LNCipedia transcript ID: lnc-SERTM2-1:5 
LNCipedia gene ID: lnc-SERTM2-1
Location (hg38): chrX:111518075-111621496
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 4149 bp
Exons: 12
Sources: NONCODE v4
Alternative transcript names: NONHSAT138183
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -7.1053 non-coding 
CPAT coding probability 4.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SERTM2-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ALG13-2:5
4.0 LINC00890:5
4.1 LINC00890:5
5.0 LINC00890:5
5.1 lnc-TEX13C-183:10
5.2 lnc-SERTM2-1:5