Transcript: lnc-SESN1-6:2

Basic information

LNCipedia transcript ID: lnc-SESN1-6:2 
LNCipedia gene ID: lnc-SESN1-6
RefSeq ID: NR_104137
Location (hg38): chr6:108908140-108924103
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 717 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_104137; NR_104137.1
Alternative gene names: ; ARMC2-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -83.0931 non-coding 
CPAT coding probability 2.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SESN1-6:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SESN1-1:2
4.0 ARMC2-AS1:2
4.1 ARMC2-AS1:2
5.0 ARMC2-AS1:2
5.1 lnc-SESN1-5:2
5.2 lnc-SESN1-6:2