Transcript: lnc-SETD1B-4:5

Basic information

LNCipedia transcript ID: lnc-SETD1B-4:5 
LNCipedia gene ID: lnc-SETD1B-4
Location (hg38): chr12:121776263-121780750
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 532 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT031438
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -55.4658 non-coding 
CPAT coding probability 0.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SETD1B-4:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SETD1B-4:1
4.0 lnc-TMEM120B-4:1
4.1 lnc-TMEM120B-4:1
5.0 lnc-TMEM120B-4:1
5.1 lnc-PSMD9-10:1
5.2 lnc-SETD1B-4:5