Transcript: lnc-SETD6-8:1

Basic information

LNCipedia transcript ID: lnc-SETD6-8:1 
LNCipedia gene ID: lnc-SETD6-8
Location (hg38): chr16:62111994-62130643
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1158 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00024430; NONHSAT142925
Alternative gene names: XLOC_011747; linc-CDH5-8


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -51.8534 non-coding 
CPAT coding probability 1.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SETD6-8:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SETD6-6:1
3.1 lnc-SETD6-8:1
4.0 lnc-SETD6-8:1
4.1 lnc-SETD6-8:1
5.0 lnc-SETD6-8:1
5.1 lnc-ADGRG1-105:1
5.2 lnc-SETD6-8:1