Transcript: lnc-SETD7-3:16

Basic information

LNCipedia transcript ID: lnc-SETD7-3:16 
LNCipedia gene ID: lnc-SETD7-3
Location (hg38): chr4:139403422-139454041
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3951 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000273247.1|ENCT00000336778.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 4.0698 non-coding 
CPAT coding probability 1.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SETD7-3:16 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SETD7-3:16
5.0 lnc-SETD7-3:16
5.1 lnc-CLGN-17:1
5.2 lnc-SETD7-3:16