Transcript: lnc-SETD7-3:19

Basic information

LNCipedia transcript ID: lnc-SETD7-3:19 
LNCipedia gene ID: lnc-SETD7-3
Location (hg38): chr4:139413816-139453745
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 400 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000273247.1|ENST00000608663.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -96.2126 non-coding 
CPAT coding probability 0.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SETD7-3:19 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SETD7-3:19
5.0 lnc-SETD7-3:19
5.1 lnc-CLGN-17:17
5.2 lnc-SETD7-3:19