Transcript: lnc-SFT2D3-2:4

Basic information

LNCipedia transcript ID: lnc-SFT2D3-2:4 
LNCipedia gene ID: lnc-SFT2D3-2
Location (hg38): chr2:127885738-127889647
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3910 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA753:2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -36.5363 non-coding 
CPAT coding probability 17.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SFT2D3-2:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-SFT2D3-2:4
4.1 lnc-SFT2D3-2:4
5.0 lnc-SFT2D3-2:4
5.1 lnc-GPR17-4:3
5.2 lnc-SFT2D3-2:4