Transcript: lnc-SFXN5-1:3

Basic information

LNCipedia transcript ID: lnc-SFXN5-1:3 
LNCipedia gene ID: lnc-SFXN5-1
Location (hg38): chr2:73022535-73070567
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 422 bp
Exons: 6
Sources: NONCODE v4
Alternative transcript names: NONHSAT071589
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -257.3249 non-coding 
CPAT coding probability 2.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SFXN5-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SFXN5-1:3
4.0 lnc-SFXN5-1:3
4.1 lnc-SFXN5-1:3
5.0 lnc-SFXN5-1:3
5.1 lnc-GKN2-91:3
5.2 lnc-SFXN5-1:3