Transcript: lnc-SGCE-3:1

Basic information

LNCipedia transcript ID: lnc-SGCE-3:1 
LNCipedia gene ID: lnc-SGCE-3
Location (hg38): chr7:94418419-94431219
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 12701 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000096485.1|HBMT00001342898.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 163.0774 coding 
CPAT coding probability 3.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SGCE-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SGCE-3:1
5.0 lnc-SGCE-3:1
5.1 lnc-PEX1-32:1
5.2 lnc-SGCE-3:1