Transcript: lnc-SGCG-6:1

Basic information

LNCipedia transcript ID: lnc-SGCG-6:1 
LNCipedia gene ID: lnc-SGCG-6
Location (hg38): chr13:22903263-22919209
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2769 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; NONCODE v4
Alternative transcript names: ENST00000515722; NONHSAT032437
Alternative gene names: ENSG00000250943; AL157931.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 26.8911 non-coding 
CPAT coding probability 2.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SGCG-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SGCG-6:1
3.1 lnc-SGCG-6:1
4.0 lnc-SGCG-6:1
4.1 lnc-SGCG-6:1
5.0 lnc-SGCG-6:1
5.1 lnc-GTF3A-93:1
5.2 lnc-SGCG-6:1