Transcript: lnc-SGK1-3:17

Basic information

LNCipedia transcript ID: lnc-SGK1-3:17 
LNCipedia gene ID: lnc-SGK1-3
Location (hg38): chr6:134525517-134539992
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 465 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000232310.2|ENST00000606039.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -68.1623 non-coding 
CPAT coding probability 1.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SGK1-3:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SGK1-3:17
5.0 lnc-SGK1-3:17
5.1 lnc-OLIG3-65:13
5.2 lnc-SGK1-3:17