Transcript: lnc-SGK1-9:2

Basic information

LNCipedia transcript ID: lnc-SGK1-9:2 
LNCipedia gene ID: lnc-SGK1-9
Location (hg38): chr6:134353744-134373509
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 258 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000090076.1|FTMT22100003331.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -134.9053 non-coding 
CPAT coding probability 0.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SGK1-9:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SGK1-9:2
5.0 lnc-SGK1-9:2
5.1 lnc-OLIG3-67:2
5.2 lnc-SGK1-9:2