Transcript: lnc-SGSH-1:9

Basic information

LNCipedia transcript ID: lnc-SGSH-1:9 
LNCipedia gene ID: lnc-SGSH-1
Location (hg38): chr17:80200764-80204165
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1474 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT056353
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -19.1566 non-coding 
CPAT coding probability 17.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SGSH-1:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SGSH-1:9
4.0 lnc-SGSH-1:9
4.1 lnc-SGSH-1:9
5.0 lnc-SGSH-1:9
5.1 lnc-SGSH-1:9
5.2 lnc-SGSH-1:9