Transcript: lnc-SGSM1-2:1

Basic information

LNCipedia transcript ID: lnc-SGSM1-2:1 
LNCipedia gene ID: lnc-SGSM1-2
Location (hg38): chr22:24764501-24766156
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1656 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT084382
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 9.2916 non-coding 
CPAT coding probability 1.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SGSM1-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SGSM1-2:1
4.0 lnc-SGSM1-2:1
4.1 lnc-SGSM1-2:1
5.0 lnc-SGSM1-2:1
5.1 lnc-CABIN1-21:1
5.2 lnc-SGSM1-2:1