Transcript: lnc-SH2D7-3:5

Basic information

LNCipedia transcript ID: lnc-SH2D7-3:5 
LNCipedia gene ID: lnc-SH2D7-3
Location (hg38): chr15:77989896-77994024
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1370 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT047508
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 17.3793 non-coding 
CPAT coding probability 85.04% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-SH2D7-3:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SH2D7-3:5
4.0 lnc-SH2D7-3:5
4.1 lnc-SH2D7-3:5
5.0 lnc-SH2D7-3:5
5.1 lnc-CRABP1-9:4
5.2 lnc-SH2D7-3:5