Transcript: lnc-SIAH2-1:7

Basic information

LNCipedia transcript ID: lnc-SIAH2-1:7 
LNCipedia gene ID: lnc-SIAH2-1
RefSeq ID: NR_121657
Location (hg38): chr3:150734471-150738985
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 703 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_121657; NR_121657.1
Alternative gene names: LOC101928105


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -98.3053 non-coding 
CPAT coding probability 3.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SIAH2-1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SIAH2-1:7
4.0 lnc-SIAH2-1:7
4.1 lnc-SIAH2-1:7
5.0 lnc-SIAH2-1:7
5.1 lnc-SIAH2-1:7
5.2 lnc-SIAH2-1:7