Transcript: lnc-SIGIRR-1:2

Basic information

LNCipedia transcript ID: lnc-SIGIRR-1:2 
LNCipedia gene ID: lnc-SIGIRR-1
Location (hg38): chr11:407889-415004
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 752 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT017244
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -87.0331 non-coding 
CPAT coding probability 7.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SIGIRR-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SIGIRR-1:2
4.0 lnc-SIGIRR-1:2
4.1 lnc-SIGIRR-1:2
5.0 lnc-SIGIRR-1:2
5.1 lnc-OR52A1-106:2
5.2 lnc-SIGIRR-1:2