Transcript: lnc-SIGIRR-1:4

Basic information

LNCipedia transcript ID: lnc-SIGIRR-1:4 
LNCipedia gene ID: lnc-SIGIRR-1
Location (hg38): chr11:409466-414989
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 729 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT017246
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -38.943 non-coding 
CPAT coding probability 3.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SIGIRR-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SIGIRR-1:4
4.0 lnc-SIGIRR-1:4
4.1 lnc-SIGIRR-1:4
5.0 lnc-SIGIRR-1:4
5.1 lnc-OR52A1-106:4
5.2 lnc-SIGIRR-1:4