Transcript: lnc-SIGLEC9-6:1

Basic information

LNCipedia transcript ID: lnc-SIGLEC9-6:1 
LNCipedia gene ID: lnc-SIGLEC9-6
Ensembl Gene ID: ENSG00000268390
Ensembl Transcript ID: ENST00000601280
Location (hg38): chr19:51043806-51052077
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 443 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT067407; ENST00000601280.1
Alternative gene names: ENSG00000268390.1; CTC-518B2.10; AC011473.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -4.3667 non-coding 
CPAT coding probability 0.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SIGLEC9-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SIGLEC9-6:1
4.0 lnc-SIGLEC9-6:1
4.1 lnc-SIGLEC9-6:1
5.0 lnc-SIGLEC9-6:1
5.1 lnc-ACP4-13:1
5.2 lnc-SIGLEC9-6:1