Transcript: lnc-SIK2-3:2

Basic information

LNCipedia transcript ID: lnc-SIK2-3:2 
LNCipedia gene ID: lnc-SIK2-3
Location (hg38): chr11:111766430-111767397
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 523 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000003833.1|MICT00000067216.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -179.0959 non-coding 
CPAT coding probability 1.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SIK2-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SIK2-3:2
5.0 lnc-SIK2-3:2
5.1 lnc-PTS-17:2
5.2 lnc-SIK2-3:2